Can I flash main router with Tomato/Kong and leave other 2 AP w Genie?

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Bullpup
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Can I flash main router with Tomato/Kong and leave other 2 AP w Genie?

First post but have been reading.  If I flash my R7000 router with upgraded software could I leave the other two cascade AP with the existing Genie software?

The current router has problems with IPV6 ICMP filtering and really don't feel like flashing all three. I have used DDWrt in the past to lower transmit output power but not much else.  

 

This is probably software questions but not sure if it was R7000 related so if in wrong forum please move.   Sorry. 

 

Thank you